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HAMAP proteomes: Plastids


Proteomes by kingdom: [Summary] Bacteria Archaea Plastids

[complete plastid genomes][plastid genes encoding proteins]

List of complete plastid genomes

The UniProt Knowledgebase currently contains 139 complete plastid proteomes that are covered by the HAMAP project
(e.g. chloroplast, cyanelle, apicoplast, non-photosynthetic plastid).

More information about a particular plastid genome can be retrieved by clicking on the EMBL genome accession number(s).
You can also retrieve all the protein(s) encoded by a particular complete plastid genome by clicking on the protein count.

UniProtKB/Swiss-Prot Release 56.5 of 25-Nov-2008
UniProtKB/TrEMBL Release 39.5 of 25-Nov-2008

Statistics
Species
Species code
EMBL genome
 Total number
of entries 		Number of UniProtKB/
Swiss-Prot entries 		Number of UniProtKB/
TrEMBL entries 		Status in UniProtKB/
Swiss-Prot
Acorus americanus (Sweetflag) ACOAM EU273602 78 17 61
   21%
Acorus calamus (Sweet flag) ACOCL AJ879453 78 56 22
   71%
Adiantum capillus-veneris (Fern) ADICA AY178864 84 84 0
Complete
Aethionema cordifolium (Lebanon stonecress) AETCO AP009366 77 46 31
   59%
Aethionema grandiflorum (Persian stone-cress) AETGR AP009367 77 47 30
   61%
Agrostis stolonifera (Creeping bentgrass) AGRST EF115543 78 63 15
   80%
Amborella trichopoda. AMBTC AJ506156 80 65 15
   81%
Aneura mirabilis (Parasitic liverwort) ANEMR EU043314 62 25 37
   40%
Angiopteris evecta (Mule's foot fern) ANGEV DQ821119 85 51 34
   60%
Anthoceros formosae (Hornwort) ANTFO AB086179 88 88 0
Complete
Arabidopsis thaliana (Mouse-ear cress) ARATH AP000423 79 79 0
Complete
Arabis hirsuta (Hairy rock-cress) ARAHI AP009369 78 46 32
   58%
Astasia longa (Euglenophycean alga) ASTLO AJ294725 45 45 0
Complete
Atropa belladonna (Belladonna) ATRBE AJ316582 81 69 12
   85%
Barbarea verna (Land cress) BARVE AP009370 79 46 33
   58%
Bigelowiella natans (Pedinomonas minutissima) BIGNA DQ851108 57 57 0
Complete
Brachypodium distachyon (Purple false brome) BRADI EU325680 75 12 63
   16%
Buxus microphylla (Little leaf boxwood) BUXMI EF380351 79 45 34
   56%
Calycanthus floridus var. glaucus CALFG AJ428413 81 65 16
   80%
Capsella bursa-pastoris (Shepherd's purse) CAPBU AP009371 80 46 34
   57%
Carica papaya (Papaya) CARPA EU431223 78 28 50
   35%
Ceratophyllum demersum (Rigid hornwort) CERDE EF614270 79 44 35
   55%
Chaetosphaeridium globosum CHAGL AF494278 95 75 20
   78%
Chara vulgaris CHAVU DQ229107 104 70 34
   67%
Chlamydomonas reinhardtii CHLRE BK000554 75 75 0
Complete
Chloranthus spicatus (Chulantree) CHLSC EF380352 81 46 35
   56%
Chlorella vulgaris (Green alga) CHLVU AB001684 88 88 0
Complete
Chlorokybus atmophyticus (Soil alga) CHLAT DQ422812 113 55 58
   48%
Cicer arietinum (Chickpea) (Garbanzo) CICAR EU835853 75 8 67
   10%
Citrus sinensis (Sweet orange) CITSI DQ864733 79 61 18
   77%
Coffea arabica (Coffee) COFAR EF044213 80 65 15
   81%
Crucihimalaya wallichii (Rock-cress) CRUWA AP009372 81 47 34
   58%
Cryptomeria japonica (Japanese cedar) CRYJA AP009377 82 27 55
   32%
Cucumis sativus (Cucumber) CUCSA AJ970307, DQ119058, DQ865975, DQ865976 87 65 22
   74%
Cuscuta exaltata (Tall dodder) CUSEX EU189132 65 37 28
   56%
Cuscuta gronovii (Common dodder) CUSGR AM711639 59 37 22
   62%
Cuscuta obtusiflora (Peruvian dodder) CUSOB EU189133 59 29 30
   49%
Cuscuta reflexa (Southern Asian dodder) CUSRE AM711640 67 46 21
   68%
Cyanidioschyzon merolae (Red alga) CYAME AB002583 207 95 112
   45%
Cyanidium caldarium CYACA AF022186 197 159 38
   80%
Cyanophora paradoxa CYAPA U30821 145 145 0
Complete
Cycas taitungensis (Prince sago) CYCTA AP009339 109 47 62
   43%
Daucus carota (Carrot) DAUCA DQ898156 79 64 15
   81%
Dioscorea elephantipes (Elephant's foot) DIOEL EF380353 79 44 35
   55%
Draba nemorosa (Woodland whitlowgrass) DRANE AP009373 78 46 32
   58%
Drimys granadensis DRIGR DQ887676 80 64 16
   80%
Eimeria tenella EIMTE AY217738 28 5 23
   17%
Emiliania huxleyi EMIHU AY741371 119 77 42
   64%
Epifagus virginiana (Beechdrops) EPIVI M81884 22 21 1
   95%
Eucalyptus globulus sp. globulus (Tasmanian blue gum) EUCGG AY780259 78 62 16
   79%
Euglena gracilis EUGGR X70810 67 67 0
Complete
Fagopyrum esculentum subsp. ancestrale (Wild buckwheat) FAGEA EU254477 78 14 64
   17%
Glycine max (Soybean) SOYBN DQ317523 78 78 0
Complete
Gossypium barbadense (Sea-island cotton) GOSBA AP009123 78 63 15
   80%
Gossypium hirsutum (Upland cotton) GOSHI DQ345959 78 63 15
   80%
Gracilaria tenuistipitata var. liui (Red alga) GRATL AY673996 203 118 85
   58%
Guillardia theta (Cryptomonas phi) GUITH AF041468 147 147 0
Complete
Guizotia abyssinica (Niger) GUIAB EU549769 79 22 57
   27%
Helianthus annus (Common sunflower) HELAN DQ383815 80 65 15
   81%
Helicosporidium sp. subsp. Simulium jonesii HELSJ DQ398104 26 26 0
Complete
Heterosigma akashiwo (strain CCMP452) HETA4 EU168191 143 2 141
   1%
Heterosigma akashiwo (strain NIES-293) HETA2 EU168190 143 2 141
   1%
Hordeum vulgare (Barley) HORVU EF115541 76 67 9
   88%
Huperzia lucidula (Shining clubmoss) HUPLU AY660566 86 65 21
   75%
Illicium oligandrum ILLOL EF380354 81 46 35
   56%
Ipomoea purpurea (Common morning glory) IPOPU EU118126 79 40 39
   50%
Jasminum nudiflorum (Winter jasmine) JASNU DQ673255 79 64 15
   81%
Lactuca sativa (Garden lettuce) LACSA AP007232, DQ383816 83 65 18
   78%
Lemna minor (Common duckweed) LEMMI DQ400350 78 32 46
   41%
Lepidium virginicum (Virginia pepperweed) LEPVR AP009374 80 46 34
   57%
Leptosira terrestris (Pleurastrum terrestre) LEPTE EF506945 88 33 55
   37%
Liriodendron tulipifera (Tuliptree) LIRTU DQ899947 80 65 15
   81%
Lobularia maritima (Sweet alyssum) LOBMA AP009375 79 45 34
   56%
Lolium perenne (Perennial ryegrass) LOLPR AM777385 77 38 39
   49%
Lotus japonicus LOTJA AP002983 77 77 0
Complete
Manihot esculenta (Cassava) (Manioc) MANES EU117376 78 27 51
   34%
Marchantia polymorpha (Liverwort) MARPO X04465 92 90 2
   97%
Mesostigma viride MESVI AF166114 105 105 0
Complete
Morus indica (Milberry) MORIN DQ226511 78 63 15
   80%
Nandina domestica (Heavenly bamboo) NANDO DQ923117 80 50 30
   62%
Nasturtium officinale (Water-cress) NASOF AP009376 79 46 33
   58%
Nephroselmis olivacea NEPOL AF137379 124 85 39
   68%
Nicotiana sylvestris (Wood tobacco) NICSY AB237912 94 65 29
   69%
Nicotiana tabacum (Common tobacco) TOBAC Z00044 95 80 15
   84%
Nicotiana tomentosiformis (Tobacco) NICTO AB240139 93 65