Tymoviridae

Molecular biology

VIRION

Non-enveloped, isometric, icosahedral, about 30 nm in diameter.

GENOME

Monopartite, linear, C-rich, ssRNA(+) genome of 6-7.5 kb. The 3’-terminus may have a tRNA-like structure or a polyA tract, depending upon the virus.

GENE EXPRESSION

The virion RNA is infectious and serves as both the genome and viral messenger RNA. The genomic RNA encodes a large replication polyprotein which is cleaved. The capsid protein is translated from a 3’-coterminal subgenomic RNA. There are additional ORFs in some genera.

REPLICATION

CYTOPLASMIC

  1. Virus penetrates into the host cell.
  2. Uncoating, and release of the viral genomic RNA into the cytoplasm.
  3. The viral RNA is translated to produce the protein necessary for RNA synthesis (replication and transcription).
  4. A negative-sense complementary ssRNA is synthesized using the genomic RNA as a template.
  5. New genomic RNA is synthesized using the negative-sense RNA as a template.
  6. The RdRp recognizes internal subgenomic promoters on the negative-sense RNA to transcribe the 3’co-terminal subgenomic RNA that will generate the capsid protein.
  7. Formation of new virus particles.

Matching UniProtKB/Swiss-Prot entries

22 entries grouped by species (reorder by proteins)

1 entry

Belladonna mottle virus (BMDV)


COAT_BMDVCoat protein (Virion protein)

1 entry

Cacao yellow mosaic virus


COAT_CAYMVCoat protein (Virion protein)

3 entries

Eggplant mosaic virus

Select_all Deselect_all  
COAT_EPMVCoat protein (Virion protein)
POLR_EPMVRNA replicase polyprotein (EC 2.7.7.48)
V70K_EPMV70 kDa protein

3 entries

Erysimum latent virus (ELV)

Select_all Deselect_all  
COAT_ELVCoat protein (Virion protein)
POLR_ELVRNA replicase polyprotein (EC 2.7.7.48)
Y48K_ELVUncharacterized 48 kDa protein

2 entries

Kennedya yellow mosaic virus (strain Jervis bay) (KYMV)

Select_all Deselect_all  
COAT_KYMVJCoat protein (Virion protein)
POLR_KYMVJRNA replicase polyprotein (EC 2.7.7.48)

3 entries

Ononis yellow mosaic virus

Select_all Deselect_all  
COAT_OYMVCoat protein (Virion protein)
POLR_OYMVRNA replicase polyprotein (EC 2.7.7.48)
V70K_OYMV66 kDa protein

1 entry

Physalis mottle virus (PhMV) (Belladonna mottle virus-Iowa)


COAT_PHMVCoat protein (Virion protein)

3 entries

Turnip yellow mosaic virus

Select_all Deselect_all  
COAT_TYMVCoat protein (Virion protein)
POLR_TYMVRNA replicase polyprotein (EC 2.7.7.48)
V70K_TYMV69 kDa protein (p69)

3 entries

Turnip yellow mosaic virus (isolate Australia)

Select_all Deselect_all  
COAT_TYMVACoat protein (Virion protein)
POLR_TYMVARNA replicase polyprotein (EC 2.7.7.48)
V70K_TYMVA69 kDa protein (p69)

2 entries

Turnip yellow mosaic virus (isolate TYMC)

Select_all Deselect_all  
POLR_TYMVCRNA replicase polyprotein (EC 2.7.7.48)
V70K_TYMVC69 kDa protein (p69)